Dynamics 365 ERP for Medical Device Manufacturing

Dynamics 365 ERP for Medical Device Manufacturing

Dynamics 365 ERP for Medical Device Manufacturing brings lot and serial traceability, device history records, and audit-ready quality management, on a single platform. Dynamics Square, a Microsoft Solutions Partner, configures Dynamics 365 ERP around FDA and ISO 13485 requirements, so you can always stay compliant.

Dynamics 365 ERP for Medical Device Manufacturing
Regulated Manufacturing Specialization

500+

Successful Implementations

150+

Certified Dynamics 365 Consultants

BC & SCM

Business Central & Supply Chain Management Expertise

Microsoft Gold Certified Partner

What Is Dynamics 365 ERP for Medical Device Manufacturing?

Dynamics 365 ERP for medical device manufacturing configures Microsoft's cloud ERP platform around the specific demands of building regulated devices: multi-level bills of materials, engineering revisions, lot and serial identification, and a device history record for every unit that ships. Production, inventory, quality, and finance run from one system, so a component lot can be traced into a finished device and out to the customer who received it, without a manual cross-reference between spreadsheets.

Two products in the Dynamics 365 family cover medical device manufacturing, and the right starting point depends on how complex your build actually is.

Dynamics 365 Business Central

Dynamics 365 Business Central

Fits smaller and mid-sized device manufacturers: contract manufacturers, single-facility producers, and companies building devices from a defined, moderately complex bill of materials.

Dynamics 365 Supply Chain Management

Dynamics 365 Supply Chain Management

The step up for multi-site device makers, companies pushing through frequent engineering changes, and operations that need deep non-conformance and CAPA tracking built in from day one.

Neither product carries FDA clearance nor an ISO 13485 certificate. Regulatory compliance belongs to your quality system, validated by your organization and assessed through FDA inspection. What the right Dynamics 365 configuration supplies is the lot and serial data, the change history, and the documented quality records that make that assessment go smoothly.

See Which Dynamics 365 Product Fits Your Operation 

Why Medical Device Manufacturers Need Purpose-Fit ERP

The Regulatory Floor Keeps Moving

The Regulatory Floor Keeps Moving

The FDA's Quality Management System Regulation took effect February 2, 2026, replacing the decades-old Quality System Regulation and incorporating ISO 13485:2016 directly into 21 CFR Part 820. Device manufacturers now work to one harmonized standard, and every process, from design transfer to supplier evaluation, gets measured against it.

One Missed Serial Number Becomes a Federal Report

One Missed Serial Number Becomes a Federal Report

A device correction or removal initiated to address a health risk has to be reported to the FDA within 10 working days under 21 CFR Part 806. That clock starts the moment you decide to act, and deciding fast depends entirely on knowing which lots, serials, and customers are actually affected. Generic inventory software tells you what's on the shelf. Where a specific unit actually went is a separate question entirely.

Engineering Complexity Outpaces Spreadsheets Fast

Engineering Complexity Outpaces Spreadsheets Fast

A multi-level bill of materials with a routing, a revision history, and a supplier for every component gets unmanageable in a spreadsheet within a single product cycle. Getting the right ERP in place before that complexity compounds is far cheaper than untangling it after the fact.

Core Capabilities of Dynamics 365 for Medical Device Manufacturing

Lot and Serial Traceability

Every component lot and every serialized unit is tracked from receipt through assembly, test, and shipment, so a single query shows a finished device's complete component history in either direction.

Device History Records

Production order data, inspection results, and disposition records accumulate automatically against each batch or serialized unit, giving you the documentation FDA expects to see for how a specific device was actually built.

Quality Management and Inspection

Set up inspection checkpoints, grade results pass or fail, and route anything that fails straight to quarantine, all native to Business Central. Supply Chain Management builds on that foundation with formal non-conformance investigation, CAPA workflows, and statistical sampling for operations running more complex quality programs.

Supplier Quality Management

Approved vendor lists, incoming inspection results, and supplier corrective action history stay tied to the components those suppliers actually shipped, so a supplier quality issue traces directly to the affected lots.

Bill of Materials and Engineering Change Control

Multi-level BOMs, routings, and revision history stay linked to production, so an engineering change carries forward into every future build without a manual update across disconnected documents.

Production Planning

MRP and MPS convert demand into a production schedule against real capacity and component availability, keeping engineering changes and supplier lead times factored into the plan from the start.

Dynamics 365 Business Central vs. Supply Chain Management for Medical Device Manufacturing

Medical device manufacturing runs as discrete manufacturing on both Dynamics 365 platforms, a different world from process industries such as pharmaceuticals. The decision here comes down to BOM complexity, quality management depth, and how many sites and entities you're running.

AspectsBusiness CentralSupply Chain Management
Best fitContract manufacturers, single-site device makersMulti-site manufacturers, complex engineering environments
Manufacturing styleDiscrete manufacturing (Premium license)Discrete manufacturing at enterprise scale
Lot and serial trackingNativeNative, with multi-attribute tracking
Quality managementNative inspection templates and quarantineQuality orders, structured non-conformance, CAPA, statistical sampling
BOM and engineering complexityMulti-level BOMs, single revision pathMulti-level BOMs with configurable products and complex change control
Organizational scaleOne facility, one legal entitySeveral entities, several sites, several currencies
Company headcount, as a rough guideUnder roughly 250 employeesAbove that, or a smaller company with unusually complex production
Starting license (USA)Premium: $110/user/monthStandard: approximately $210/user/month

A device manufacturer building a defined product line at one facility gets genuine manufacturing and quality functionality out of Business Central Premium, at a cost and rollout timeline sized for a single-site operation. Once you're running multiple sites, managing engineering revisions constantly, or need CAPA and statistical sampling as a standard part of how quality operates, that setup stops being enough, and Supply Chain Management's deeper engine takes over.

Worth stating plainly: neither platform is a design control system. Manufacturers with substantial design history file obligations typically layer a dedicated electronic quality management system on top of Dynamics 365 for design controls and validated electronic signatures, with Dynamics 365 carrying production, inventory, costing, and the device history record underneath. We'll surface this early in discovery if it applies to your operation.

Find the Platform That Fits Your Build 

Which Dynamics 365 Solution Is Suitable for Medical Device Manufacturers?

By now you've seen what each platform can do. Picking between them comes down to matching the ERP to your actual operation.

The Cost of the Wrong Fit

Get it wrong, and you pay for it twice: once for a system that's the wrong size for you, and again for all the manual work needed to make it fit.

How We Make the Call

That's why every conversation starts the same way. We look at your bill of materials, how mature your quality process is, how many sites you run, and which rules you need to follow. Then we tell you which platform makes sense for you.

How We Implement: Success by Design

Every deployment goes through five stages under Microsoft's Success by Design framework. For a regulated device manufacturer, that structure earns its keep most during Prepare and Operate, where validation testing and documented sign-off happen before go-live, well ahead of any scramble to catch up after launch.

Discover

We map your current production floor, your BOM and routing structure, and where your quality system already stands against FDA and ISO 13485 expectations.

1
2

Initiate

Platform choice, project scope, and governance get confirmed before a single configuration decision gets made.

Implement

The system gets built out, historical data gets migrated, and validation documentation gets written in step with the configuration itself, as it happens.

3
4

Prepare

Your team runs user acceptance testing against real production scenarios, trains on the finished system, and works through a cutover plan built around your actual manufacturing schedule.

Operate

We stay engaged after go-live, through your first audits, supplier changes, and whatever process refinements come next.

5

Dynamics 365 Pricing for Medical Device Manufacturers in the USA

Figures below come from Microsoft's current US pricing list. Total cost also depends on user count, any ISV extensions for design control or eQMS integration, and the shape of your implementation.

Dynamics 365 Business Central

Essentials
$80/user/month

Core financials, sales, purchasing, and inventory.

Premium
$110/user/month

Everything in Essentials, plus production orders, BOMs, routings, work and machine centers, MRP and MPS, and native Quality Management.

Team Members
$8/user/month

Read, approve, and basic self-service access.

Dynamics 365 Supply Chain Management

Standard
~$210/user/month

Full discrete manufacturing, advanced quality management, and warehouse management.

Premium
~$300/user/month

Adds advanced analytics and financial planning capabilities.

Licensing is only part of the bill. A single-site Business Central deployment generally costs somewhere in the five-figure range once implementation is added in. A multi-site Supply Chain Management build, carrying validation work, data migration, and eQMS integration, climbs well beyond that, often into six figures.

Request a Quote for Your Facility 
Medical Supplies Manufacturer, Florida - Case Study

Case Study

Medical Supplies Manufacturer, Florida

A Florida-based medical supplies manufacturer running QuickBooks and disconnected systems needed one platform for finance, inventory, sales, and service.

Dynamics Square implemented Dynamics 365 Business Central with Sales and Customer Service, adding True Commerce EDI and Power BI reporting.

The result: tighter operations, accurate financials, stronger sales visibility, and simpler workflows across the team.

Read the Full Case Study  

Why Medical Device Manufacturers Choose Dynamics Square

Regulated Industry Experience

Lot and serial traceability, device history records, and quality holds are worked into project scope from the first conversation, built on how FDA and ISO 13485 actually assess a quality system during inspection.

The Right Product, Recommended Honestly

Ask us directly which platform fits, Business Central or Supply Chain Management, and you'll get a direct answer tied to your production complexity, the kind that comes from matching the tool to the job, no matter which product carries the bigger price tag.

Certified Microsoft Expertise

Our team stays current on certifications across both platforms, Business Central and Supply Chain Management alike, so what you're comparing is two genuinely understood options, weighed on their merits.

Support That Continues Well Past Go-Live

Your quality system keeps evolving after launch, through design changes, supplier updates, and audits. Our involvement continues right alongside it.

Building devices that go inside or onto a patient carries a level of accountability most software vendors rarely think through. Dynamics Square treats that responsibility as the starting point for every medical device engagement.

Frequently Asked Questions

Yes, for manufacturers of every scale, as long as the platform matches the complexity of the build. Business Central covers smaller and mid-sized device makers well; larger, multi-site operations typically need Supply Chain Management's deeper capability.

Yes, both platforms assign lot or serial identifiers at receipt or production and carry them through every subsequent transaction, giving full traceability from component to finished, shipped device.

Yes, set up inspection checkpoints, grade results pass or fail, and quarantine anything non-conforming, all native to Business Central's Quality Management module. Supply Chain Management scales that up with formal non-conformance investigation, CAPA, and statistical sampling for larger quality programs.

Yes, production, inspection, and disposition data accumulate against each unit or lot automatically, giving you the documented production history the FDA expects to review during an inspection.

FDA clearance and ISO 13485 certification apply to your organization's quality system, achieved through validated processes and assessed by FDA inspection under the Quality Management System Regulation. Dynamics 365 supports that system with traceability, documentation, and quality records that make it easier to demonstrate compliance during an inspection.

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